BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031A02LP1|AL429311
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig984 1755 0.0
>3x_Contig984
Length = 4208
Score = 1755 bits (880), Expect = 0.0
Identities = 933/952 (98%), Gaps = 3/952 (0%)
Strand = Plus / Minus
Query: 12 aagaggtggtac-gattcgatccagaccagtgcaac-atcggaacgataaaacagtgcat 69
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3520 aagaggtggtaccgattcgatccagaccagtgcaaccatcggaacgataaaacagtgcat 3461
Query: 70 agaaaaagargwraaamaatgwatgcacacaataartaaactagtcagacgtataccgga 129
||| ||| | | |||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 3460 ggaattagaggtgtgacaatgtatgcacacaataagtaaactagtcagacgtataccgga 3401
Query: 130 tctatataccatgtgacatgctgcgactgcgaaatcacgaaatagtgtaactttttcttt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3400 tctatataccatgtgacatgctgcgactgcgaaatcacgaaatagtgtaactttttcttt 3341
Query: 190 cccgttttttcgttgatttaacggtgtcgagagaaaagcaaaacgcgaagtttcgtctcg 249
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3340 cccgttttttcgttgatttaacggtgtcgagagagaagcaaaacgcgaagtttcgtctcg 3281
Query: 250 aacgaaaagaagttttaacggatacggtacttaatgcatgtatagagtttagatatgggt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3280 aacgaaaagaagttttaacggatacggtacttaatgcatgtatagagtttagatatgggt 3221
Query: 310 agattttcaatggggaccacgaaaaaaaagtgtcagttttatagttttggaaattacatt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3220 agattttcaatggggaccacgaaaaaaaagtgtcagttttatagttttggaaattacatt 3161
Query: 370 acttgattgtgttttaattagcatttttctttccttggtcgtcttgataactgatgcagc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3160 acttgattgtgttttaattagcatttttctttccttggtcgtcttgataactgatgcagc 3101
Query: 430 ttgaagtacggttagatcagaaggacaacgggtgaattggattctgaagatcacgaaata 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3100 ttgaagtacggttagatcagaaggacaacgggtgaattggattctgaagatcacgaaata 3041
Query: 490 aaattactattccaagatcgcatagttttgggtatcaggtaccaccgcattgatgtattt 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3040 aaattactattccaagatcgcatagttttgggtatcaggtaccaccgcattgatgtattt 2981
Query: 550 actgtaagtagacaatggcagcgtgccttttttggcgcattgataaatgtgtaacctgga 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2980 actgtaagtagacaatggcagcgtgccttttttggcgcattgataaatgtgtaacctgga 2921
Query: 610 gactcgcgaaggttcaaacatatataaaagagagattaggatcggaaggatgaagcatct 669
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2920 gactcgcgaaggttcagacatatataaaagagagattagggtcggaaggatgaagcatct 2861
Query: 670 tccagtactgcctgtcatgttaggcacaattttgggagcatatcgtaagagcccaacaag 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2860 tccagtactgcctgtcatgttaggcacaattttgggagcatatcgtaagagcccaacaag 2801
Query: 730 cctataaagtctaagcatgttcaagaagaagagtttggaaattctgttcgattcaccagt 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2800 cctataaagtctaagcatgttcaagaagaagagtttggaaattctgttcgattcaccagt 2741
Query: 790 gagcgatgatatgatcaaatttttaactgatcacgctttgagagtgatt-ctacacagaa 848
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2740 gagcgatgatatgatcaaatttttaactgatcacgctttgagagtgattcctacacagaa 2681
Query: 849 cagaaamcaaagatacccaccttcaccaccgggcactccatccagtaagaaccacaatgg 908
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2680 cagaaaccaaagatacccaccttcaccaccgggcactccatccagtaagaaccacaatgg 2621
Query: 909 agtacccagtctaatgacgttcatttcgagattagtacggkacacgaacgtt 960
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2620 agtacccagtctaatgacgttcatttcgagattagtacggtacacgaacgtt 2569
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6543
Number of Sequences: 1807
Number of extensions: 6543
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)